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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9467810 chr6:26608261 A/C ZNF322B chr9:99957633-99961910:- 0.72 15.3 2.79E-43 Box Plot
THCA rs9467813 chr6:26626036 C/G ZNF322B chr9:99957633-99961910:- 0.73 15.3 2.8E-43 Box Plot
THCA rs9467831 chr6:26670613 A/G ZNF322B chr9:99957633-99961910:- 0.73 14.84 3.12E-41 Box Plot
THCA rs9467882 chr6:26759237 T/C ZNF322B chr9:99957633-99961910:- -0.54 -8.9 1.2E-17 Box Plot
THCA rs9468009 chr6:27184341 T/A ZNF322B chr9:99957633-99961910:- -0.39 -6.23 1.04E-9 Box Plot
THCA rs9468010 chr6:27189209 G/C ZNF322B chr9:99957633-99961910:- -0.41 -6.53 1.67E-10 Box Plot
THCA rs9468013 chr6:27195014 A/T ZNF322B chr9:99957633-99961910:- -0.41 -6.6 1.11E-10 Box Plot
THCA rs9468015 chr6:27198718 A/G ZNF322B chr9:99957633-99961910:- -0.4 -6.4 3.68E-10 Box Plot
THCA rs9468069 chr6:27299843 T/C ZNF322B chr9:99957633-99961910:- -0.42 -6.15 1.6E-9 Box Plot
THCA rs9468248 chr6:27843742 A/G BTN3A2 chr6:26365387-26378548:+ -0.28 -6.4 3.78E-10 Box Plot
THCA rs9468286 chr6:28079428 C/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.1 2.25E-9 Box Plot
THCA rs9468287 chr6:28079741 G/T BTN3A2 chr6:26365387-26378548:+ -0.55 -9.79 9.17E-21 Box Plot
THCA rs9468287 chr6:28079741 G/T ZFP57 chr6:29640169-29648887:- 0.63 7.58 1.85E-13 Box Plot
THCA rs9468290 chr6:28087674 C/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.1 2.25E-9 Box Plot
THCA rs9468295 chr6:28112713 T/C BTN3A2 chr6:26365387-26378548:+ -0.3 -6.36 4.8E-10 Box Plot